Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rab43Q8CG50 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Rab43Q8CG50 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
Rab43Q8CG50 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rab43Q8CG50 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rab43Q8CG50 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rab43Q8CG50 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rab43Q8CG50 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rab43Q8CG50 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rab43Q8CG50 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rab43Q8CG50 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.14■■□□□ 1.62
Rab43Q8CG50 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Rab43Q8CG50 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rab43Q8CG50 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rab43Q8CG50 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rab43Q8CG50 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rab43Q8CG50 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rab43Q8CG50 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rab43Q8CG50 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rab43Q8CG50 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rab43Q8CG50 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.08■■□□□ 1.61
Rab43Q8CG50 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.07■■□□□ 1.6
Rab43Q8CG50 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
Rab43Q8CG50 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rab43Q8CG50 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Rab43Q8CG50 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rab43Q8CG50 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rab43Q8CG50 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25■■□□□ 1.59
Rab43Q8CG50 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25■■□□□ 1.59
Rab43Q8CG50 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rab43Q8CG50 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Rab43Q8CG50 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rab43Q8CG50 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.95■■□□□ 1.58
Rab43Q8CG50 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rab43Q8CG50 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.94■■□□□ 1.58
Rab43Q8CG50 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rab43Q8CG50 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rab43Q8CG50 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rab43Q8CG50 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rab43Q8CG50 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rab43Q8CG50 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rab43Q8CG50 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Rab43Q8CG50 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rab43Q8CG50 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rab43Q8CG50 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.87■■□□□ 1.57
Rab43Q8CG50 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.86■■□□□ 1.57
Rab43Q8CG50 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rab43Q8CG50 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.85■■□□□ 1.57
Rab43Q8CG50 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rab43Q8CG50 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rab43Q8CG50 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Rab43Q8CG50 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rab43Q8CG50 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rab43Q8CG50 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Rab43Q8CG50 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rab43Q8CG50 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rab43Q8CG50 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rab43Q8CG50 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rab43Q8CG50 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.8■■□□□ 1.56
Rab43Q8CG50 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Rab43Q8CG50 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rab43Q8CG50 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rab43Q8CG50 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rab43Q8CG50 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.79■■□□□ 1.56
Rab43Q8CG50 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rab43Q8CG50 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rab43Q8CG50 Gm8503-201ENSMUST00000118131 455 ntBASIC24.75■■□□□ 1.55
Rab43Q8CG50 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rab43Q8CG50 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rab43Q8CG50 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rab43Q8CG50 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rab43Q8CG50 Gm6821-201ENSMUST00000107540 542 ntBASIC24.73■■□□□ 1.55
Rab43Q8CG50 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Rab43Q8CG50 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Rab43Q8CG50 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rab43Q8CG50 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rab43Q8CG50 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.7■■□□□ 1.54
Rab43Q8CG50 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.7■■□□□ 1.54
Rab43Q8CG50 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rab43Q8CG50 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.69■■□□□ 1.54
Rab43Q8CG50 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rab43Q8CG50 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rab43Q8CG50 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rab43Q8CG50 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Rab43Q8CG50 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Rab43Q8CG50 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.68■■□□□ 1.54
Rab43Q8CG50 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rab43Q8CG50 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rab43Q8CG50 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rab43Q8CG50 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rab43Q8CG50 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rab43Q8CG50 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rab43Q8CG50 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rab43Q8CG50 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rab43Q8CG50 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.62■■□□□ 1.53
Rab43Q8CG50 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rab43Q8CG50 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Rab43Q8CG50 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rab43Q8CG50 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.58■■□□□ 1.53
Rab43Q8CG50 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms