Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf18Q8BM39 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Prpf18Q8BM39 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.74■■□□□ 1.39
Prpf18Q8BM39 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf18Q8BM39 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf18Q8BM39 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf18Q8BM39 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Prpf18Q8BM39 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Prpf18Q8BM39 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf18Q8BM39 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf18Q8BM39 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf18Q8BM39 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Prpf18Q8BM39 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.66■■□□□ 1.38
Prpf18Q8BM39 Gm27322-201ENSMUST00000184007 104 ntBASIC23.66■■□□□ 1.38
Prpf18Q8BM39 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Prpf18Q8BM39 Amer2-203ENSMUST00000225247 2662 ntBASIC23.65■■□□□ 1.38
Prpf18Q8BM39 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf18Q8BM39 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf18Q8BM39 Gm26115-201ENSMUST00000175605 87 ntBASIC23.64■■□□□ 1.37
Prpf18Q8BM39 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Prpf18Q8BM39 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.63■■□□□ 1.37
Prpf18Q8BM39 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf18Q8BM39 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf18Q8BM39 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Prpf18Q8BM39 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Prpf18Q8BM39 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Prpf18Q8BM39 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Gm8109-201ENSMUST00000194076 746 ntBASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prpf18Q8BM39 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf18Q8BM39 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.54■■□□□ 1.36
Prpf18Q8BM39 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.53■■□□□ 1.36
Prpf18Q8BM39 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf18Q8BM39 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf18Q8BM39 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf18Q8BM39 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf18Q8BM39 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.49■■□□□ 1.35
Prpf18Q8BM39 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Prpf18Q8BM39 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf18Q8BM39 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Prpf18Q8BM39 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf18Q8BM39 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Prpf18Q8BM39 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Prpf18Q8BM39 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf18Q8BM39 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf18Q8BM39 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Prpf18Q8BM39 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf18Q8BM39 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf18Q8BM39 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.39■■□□□ 1.34
Prpf18Q8BM39 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf18Q8BM39 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf18Q8BM39 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
Prpf18Q8BM39 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.37■■□□□ 1.33
Prpf18Q8BM39 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf18Q8BM39 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf18Q8BM39 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf18Q8BM39 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Prpf18Q8BM39 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf18Q8BM39 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf18Q8BM39 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf18Q8BM39 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Prpf18Q8BM39 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf18Q8BM39 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf18Q8BM39 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf18Q8BM39 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.32■■□□□ 1.32
Prpf18Q8BM39 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf18Q8BM39 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf18Q8BM39 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
Prpf18Q8BM39 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf18Q8BM39 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf18Q8BM39 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf18Q8BM39 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf18Q8BM39 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf18Q8BM39 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf18Q8BM39 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf18Q8BM39 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf18Q8BM39 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf18Q8BM39 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf18Q8BM39 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf18Q8BM39 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf18Q8BM39 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf18Q8BM39 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf18Q8BM39 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf18Q8BM39 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.21■■□□□ 1.31
Prpf18Q8BM39 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf18Q8BM39 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf18Q8BM39 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms