Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Usp6nlQ80XC3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Usp6nlQ80XC3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.73■■■□□ 2.19
Usp6nlQ80XC3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Usp6nlQ80XC3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.72■■■□□ 2.19
Usp6nlQ80XC3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Usp6nlQ80XC3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Usp6nlQ80XC3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Usp6nlQ80XC3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Usp6nlQ80XC3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Usp6nlQ80XC3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.69■■■□□ 2.18
Usp6nlQ80XC3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.68■■■□□ 2.18
Usp6nlQ80XC3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Usp6nlQ80XC3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Usp6nlQ80XC3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Usp6nlQ80XC3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp6nlQ80XC3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.66■■■□□ 2.18
Usp6nlQ80XC3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp6nlQ80XC3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Usp6nlQ80XC3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Usp6nlQ80XC3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Usp6nlQ80XC3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.59■■■□□ 2.17
Usp6nlQ80XC3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.58■■■□□ 2.17
Usp6nlQ80XC3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Usp6nlQ80XC3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Usp6nlQ80XC3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Usp6nlQ80XC3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.52■■■□□ 2.16
Usp6nlQ80XC3 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.52■■■□□ 2.16
Usp6nlQ80XC3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Usp6nlQ80XC3 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.51■■■□□ 2.15
Usp6nlQ80XC3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Usp6nlQ80XC3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Usp6nlQ80XC3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Usp6nlQ80XC3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Usp6nlQ80XC3 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.46■■■□□ 2.15
Usp6nlQ80XC3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Usp6nlQ80XC3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
Usp6nlQ80XC3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Usp6nlQ80XC3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Usp6nlQ80XC3 Gm8503-201ENSMUST00000118131 455 ntBASIC28.43■■■□□ 2.14
Usp6nlQ80XC3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Usp6nlQ80XC3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Usp6nlQ80XC3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.4■■■□□ 2.14
Usp6nlQ80XC3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Usp6nlQ80XC3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Usp6nlQ80XC3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp6nlQ80XC3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Usp6nlQ80XC3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Usp6nlQ80XC3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Usp6nlQ80XC3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Usp6nlQ80XC3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.31■■■□□ 2.12
Usp6nlQ80XC3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Usp6nlQ80XC3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Usp6nlQ80XC3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp6nlQ80XC3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp6nlQ80XC3 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.29■■■□□ 2.12
Usp6nlQ80XC3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Usp6nlQ80XC3 Gm6821-201ENSMUST00000107540 542 ntBASIC28.28■■■□□ 2.12
Usp6nlQ80XC3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.28■■■□□ 2.12
Usp6nlQ80XC3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Usp6nlQ80XC3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Usp6nlQ80XC3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Usp6nlQ80XC3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Usp6nlQ80XC3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Usp6nlQ80XC3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Usp6nlQ80XC3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Usp6nlQ80XC3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Usp6nlQ80XC3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp6nlQ80XC3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp6nlQ80XC3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp6nlQ80XC3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.21■■■□□ 2.11
Usp6nlQ80XC3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.21■■■□□ 2.11
Usp6nlQ80XC3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Usp6nlQ80XC3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Usp6nlQ80XC3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Usp6nlQ80XC3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Usp6nlQ80XC3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
Usp6nlQ80XC3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Usp6nlQ80XC3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Usp6nlQ80XC3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Usp6nlQ80XC3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Usp6nlQ80XC3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Usp6nlQ80XC3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Usp6nlQ80XC3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Usp6nlQ80XC3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Usp6nlQ80XC3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Usp6nlQ80XC3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Usp6nlQ80XC3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Usp6nlQ80XC3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Usp6nlQ80XC3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Usp6nlQ80XC3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms