Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Best3Q6H1V1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Best3Q6H1V1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.35■■■□□ 2.61
Best3Q6H1V1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Best3Q6H1V1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.34■■■□□ 2.61
Best3Q6H1V1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
Best3Q6H1V1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Best3Q6H1V1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Best3Q6H1V1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Best3Q6H1V1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Best3Q6H1V1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Best3Q6H1V1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Best3Q6H1V1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Best3Q6H1V1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Best3Q6H1V1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Best3Q6H1V1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.3■■■□□ 2.6
Best3Q6H1V1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Best3Q6H1V1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Best3Q6H1V1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Best3Q6H1V1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Best3Q6H1V1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
Best3Q6H1V1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Best3Q6H1V1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.18■■■□□ 2.58
Best3Q6H1V1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Best3Q6H1V1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Best3Q6H1V1 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.15■■■□□ 2.58
Best3Q6H1V1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Best3Q6H1V1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Best3Q6H1V1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Best3Q6H1V1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.11■■■□□ 2.57
Best3Q6H1V1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Best3Q6H1V1 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.11■■■□□ 2.57
Best3Q6H1V1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Best3Q6H1V1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Best3Q6H1V1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Best3Q6H1V1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Best3Q6H1V1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Best3Q6H1V1 Gm8503-201ENSMUST00000118131 455 ntBASIC31.06■■■□□ 2.56
Best3Q6H1V1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.06■■■□□ 2.56
Best3Q6H1V1 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.04■■■□□ 2.56
Best3Q6H1V1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Best3Q6H1V1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.01■■■□□ 2.55
Best3Q6H1V1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Best3Q6H1V1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Best3Q6H1V1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31■■■□□ 2.55
Best3Q6H1V1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31■■■□□ 2.55
Best3Q6H1V1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Best3Q6H1V1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Best3Q6H1V1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Best3Q6H1V1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Best3Q6H1V1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Best3Q6H1V1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Best3Q6H1V1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Best3Q6H1V1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Best3Q6H1V1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
Best3Q6H1V1 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.92■■■□□ 2.54
Best3Q6H1V1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Best3Q6H1V1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Best3Q6H1V1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Best3Q6H1V1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.9■■■□□ 2.54
Best3Q6H1V1 Gm6821-201ENSMUST00000107540 542 ntBASIC30.87■■■□□ 2.53
Best3Q6H1V1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.87■■■□□ 2.53
Best3Q6H1V1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Best3Q6H1V1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Best3Q6H1V1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Best3Q6H1V1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Best3Q6H1V1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Best3Q6H1V1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Best3Q6H1V1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Best3Q6H1V1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.82■■■□□ 2.52
Best3Q6H1V1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Best3Q6H1V1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Best3Q6H1V1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Best3Q6H1V1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Best3Q6H1V1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Best3Q6H1V1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Best3Q6H1V1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.78■■■□□ 2.52
Best3Q6H1V1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Best3Q6H1V1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Best3Q6H1V1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Best3Q6H1V1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.76■■■□□ 2.51
Best3Q6H1V1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Best3Q6H1V1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Best3Q6H1V1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
Best3Q6H1V1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Best3Q6H1V1 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.73■■■□□ 2.51
Best3Q6H1V1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Best3Q6H1V1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Best3Q6H1V1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Best3Q6H1V1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Best3Q6H1V1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Best3Q6H1V1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Best3Q6H1V1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Best3Q6H1V1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Best3Q6H1V1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.66■■■□□ 2.5
Best3Q6H1V1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Best3Q6H1V1 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.65■■■□□ 2.5
Best3Q6H1V1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.63■■■□□ 2.49
Best3Q6H1V1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.62■■■□□ 2.49
Best3Q6H1V1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.62■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms