Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Frem1Q684R7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Frem1Q684R7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Frem1Q684R7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Frem1Q684R7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Frem1Q684R7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Frem1Q684R7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Frem1Q684R7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Frem1Q684R7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Frem1Q684R7 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.52■■□□□ 1.2
Frem1Q684R7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.51■■□□□ 1.19
Frem1Q684R7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Frem1Q684R7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Frem1Q684R7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Frem1Q684R7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Frem1Q684R7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Frem1Q684R7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Frem1Q684R7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Frem1Q684R7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Frem1Q684R7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.47■■□□□ 1.19
Frem1Q684R7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Frem1Q684R7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Frem1Q684R7 Gm24970-201ENSMUST00000175582 82 ntBASIC22.45■■□□□ 1.18
Frem1Q684R7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Frem1Q684R7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Frem1Q684R7 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.43■■□□□ 1.18
Frem1Q684R7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Frem1Q684R7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.43■■□□□ 1.18
Frem1Q684R7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.43■■□□□ 1.18
Frem1Q684R7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Frem1Q684R7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.42■■□□□ 1.18
Frem1Q684R7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Frem1Q684R7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.42■■□□□ 1.18
Frem1Q684R7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
Frem1Q684R7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Frem1Q684R7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Frem1Q684R7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Frem1Q684R7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Frem1Q684R7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.37■■□□□ 1.17
Frem1Q684R7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Frem1Q684R7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Frem1Q684R7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Frem1Q684R7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Frem1Q684R7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Frem1Q684R7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Frem1Q684R7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Frem1Q684R7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Frem1Q684R7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.32■■□□□ 1.16
Frem1Q684R7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Frem1Q684R7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.29■■□□□ 1.16
Frem1Q684R7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Frem1Q684R7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Frem1Q684R7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Frem1Q684R7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Frem1Q684R7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Frem1Q684R7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.28■■□□□ 1.16
Frem1Q684R7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Frem1Q684R7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Frem1Q684R7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Frem1Q684R7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Frem1Q684R7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Frem1Q684R7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Frem1Q684R7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Frem1Q684R7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.25■■□□□ 1.15
Frem1Q684R7 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.25■■□□□ 1.15
Frem1Q684R7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.23■■□□□ 1.15
Frem1Q684R7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Frem1Q684R7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Frem1Q684R7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Frem1Q684R7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Frem1Q684R7 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.21■■□□□ 1.15
Frem1Q684R7 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.21■■□□□ 1.15
Frem1Q684R7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Frem1Q684R7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Frem1Q684R7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Frem1Q684R7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Frem1Q684R7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Frem1Q684R7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Frem1Q684R7 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.16■■□□□ 1.14
Frem1Q684R7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Frem1Q684R7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.15■■□□□ 1.14
Frem1Q684R7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Frem1Q684R7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Frem1Q684R7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.14■■□□□ 1.13
Frem1Q684R7 Gm8503-201ENSMUST00000118131 455 ntBASIC22.12■■□□□ 1.13
Frem1Q684R7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Frem1Q684R7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Frem1Q684R7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Frem1Q684R7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Frem1Q684R7 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.1■■□□□ 1.13
Frem1Q684R7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Frem1Q684R7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Frem1Q684R7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Frem1Q684R7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Frem1Q684R7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Frem1Q684R7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Frem1Q684R7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Frem1Q684R7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Frem1Q684R7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Frem1Q684R7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms