Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Commd3Q63829 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Commd3Q63829 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Commd3Q63829 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Commd3Q63829 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Commd3Q63829 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Commd3Q63829 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Commd3Q63829 Mipep-204ENSMUST00000225043 1548 ntBASIC20.81■□□□□ 0.92
Commd3Q63829 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Commd3Q63829 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Commd3Q63829 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Commd3Q63829 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Commd3Q63829 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
Commd3Q63829 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.78■□□□□ 0.92
Commd3Q63829 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Commd3Q63829 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Commd3Q63829 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Commd3Q63829 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Commd3Q63829 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Commd3Q63829 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Commd3Q63829 Rab21-202ENSMUST00000218831 843 ntBASIC20.73■□□□□ 0.91
Commd3Q63829 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Commd3Q63829 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Commd3Q63829 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Commd3Q63829 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.7■□□□□ 0.91
Commd3Q63829 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Commd3Q63829 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Commd3Q63829 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Commd3Q63829 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Commd3Q63829 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Commd3Q63829 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Commd3Q63829 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.66■□□□□ 0.9
Commd3Q63829 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Commd3Q63829 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.66■□□□□ 0.9
Commd3Q63829 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Commd3Q63829 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Commd3Q63829 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Commd3Q63829 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Commd3Q63829 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.63■□□□□ 0.89
Commd3Q63829 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Commd3Q63829 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Commd3Q63829 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Commd3Q63829 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Commd3Q63829 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Commd3Q63829 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Commd3Q63829 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Commd3Q63829 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Commd3Q63829 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Commd3Q63829 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Commd3Q63829 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Commd3Q63829 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Commd3Q63829 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Commd3Q63829 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.58■□□□□ 0.89
Commd3Q63829 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.58■□□□□ 0.89
Commd3Q63829 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.58■□□□□ 0.89
Commd3Q63829 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Commd3Q63829 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Commd3Q63829 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Commd3Q63829 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.56■□□□□ 0.88
Commd3Q63829 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Commd3Q63829 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Commd3Q63829 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.56■□□□□ 0.88
Commd3Q63829 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Commd3Q63829 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Commd3Q63829 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Commd3Q63829 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Commd3Q63829 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Commd3Q63829 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.54■□□□□ 0.88
Commd3Q63829 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Commd3Q63829 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Commd3Q63829 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Commd3Q63829 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Commd3Q63829 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Commd3Q63829 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Commd3Q63829 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Commd3Q63829 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Commd3Q63829 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Commd3Q63829 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Commd3Q63829 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Commd3Q63829 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Commd3Q63829 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Commd3Q63829 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Commd3Q63829 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Commd3Q63829 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Commd3Q63829 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Commd3Q63829 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Commd3Q63829 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Commd3Q63829 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Commd3Q63829 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.47■□□□□ 0.87
Commd3Q63829 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Commd3Q63829 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Commd3Q63829 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Commd3Q63829 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Commd3Q63829 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Commd3Q63829 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Commd3Q63829 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Commd3Q63829 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Commd3Q63829 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.43■□□□□ 0.86
Commd3Q63829 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Commd3Q63829 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms