Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx4Q61496 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
Ddx4Q61496 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx4Q61496 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.9■■■□□ 2.22
Ddx4Q61496 Gm8503-201ENSMUST00000118131 455 ntBASIC28.87■■■□□ 2.21
Ddx4Q61496 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx4Q61496 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx4Q61496 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
Ddx4Q61496 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ddx4Q61496 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.84■■■□□ 2.21
Ddx4Q61496 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Ddx4Q61496 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx4Q61496 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ddx4Q61496 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx4Q61496 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Ddx4Q61496 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx4Q61496 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Ddx4Q61496 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx4Q61496 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Ddx4Q61496 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx4Q61496 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx4Q61496 Gm6821-201ENSMUST00000107540 542 ntBASIC28.73■■■□□ 2.19
Ddx4Q61496 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.73■■■□□ 2.19
Ddx4Q61496 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.72■■■□□ 2.19
Ddx4Q61496 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.71■■■□□ 2.19
Ddx4Q61496 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ddx4Q61496 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx4Q61496 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx4Q61496 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx4Q61496 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx4Q61496 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx4Q61496 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx4Q61496 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
Ddx4Q61496 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx4Q61496 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx4Q61496 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx4Q61496 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx4Q61496 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx4Q61496 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.59■■■□□ 2.17
Ddx4Q61496 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx4Q61496 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx4Q61496 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx4Q61496 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.58■■■□□ 2.17
Ddx4Q61496 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.58■■■□□ 2.17
Ddx4Q61496 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Ddx4Q61496 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Ddx4Q61496 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Ddx4Q61496 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ddx4Q61496 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Ddx4Q61496 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ddx4Q61496 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx4Q61496 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx4Q61496 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Ddx4Q61496 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ddx4Q61496 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.47■■■□□ 2.15
Ddx4Q61496 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.44■■■□□ 2.14
Ddx4Q61496 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx4Q61496 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx4Q61496 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx4Q61496 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.43■■■□□ 2.14
Ddx4Q61496 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ddx4Q61496 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ddx4Q61496 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx4Q61496 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Ddx4Q61496 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.39■■■□□ 2.14
Ddx4Q61496 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Ddx4Q61496 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.38■■■□□ 2.13
Ddx4Q61496 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.37■■■□□ 2.13
Ddx4Q61496 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ddx4Q61496 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx4Q61496 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx4Q61496 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Ddx4Q61496 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx4Q61496 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.35■■■□□ 2.13
Ddx4Q61496 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx4Q61496 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Ddx4Q61496 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ddx4Q61496 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ddx4Q61496 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ddx4Q61496 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ddx4Q61496 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ddx4Q61496 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ddx4Q61496 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Ddx4Q61496 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Ddx4Q61496 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.25■■■□□ 2.11
Ddx4Q61496 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
Ddx4Q61496 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ddx4Q61496 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ddx4Q61496 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ddx4Q61496 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ddx4Q61496 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ddx4Q61496 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.21■■■□□ 2.11
Ddx4Q61496 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ddx4Q61496 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Ddx4Q61496 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.2■■■□□ 2.1
Ddx4Q61496 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ddx4Q61496 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ddx4Q61496 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ddx4Q61496 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ddx4Q61496 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.18■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms