Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Shroom1Q5SX79 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shroom1Q5SX79 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Shroom1Q5SX79 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Shroom1Q5SX79 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom1Q5SX79 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
Shroom1Q5SX79 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shroom1Q5SX79 Gm24970-201ENSMUST00000175582 82 ntBASIC27.09■■□□□ 1.93
Shroom1Q5SX79 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Shroom1Q5SX79 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom1Q5SX79 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom1Q5SX79 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom1Q5SX79 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom1Q5SX79 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.06■■□□□ 1.92
Shroom1Q5SX79 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom1Q5SX79 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom1Q5SX79 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.03■■□□□ 1.92
Shroom1Q5SX79 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Shroom1Q5SX79 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
Shroom1Q5SX79 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.01■■□□□ 1.91
Shroom1Q5SX79 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.01■■□□□ 1.91
Shroom1Q5SX79 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shroom1Q5SX79 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Shroom1Q5SX79 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27■■□□□ 1.91
Shroom1Q5SX79 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Shroom1Q5SX79 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.99■■□□□ 1.91
Shroom1Q5SX79 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.98■■□□□ 1.91
Shroom1Q5SX79 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Shroom1Q5SX79 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Shroom1Q5SX79 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.96■■□□□ 1.91
Shroom1Q5SX79 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Shroom1Q5SX79 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
Shroom1Q5SX79 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom1Q5SX79 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom1Q5SX79 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom1Q5SX79 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom1Q5SX79 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom1Q5SX79 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom1Q5SX79 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom1Q5SX79 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom1Q5SX79 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Shroom1Q5SX79 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.88■■□□□ 1.89
Shroom1Q5SX79 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.87■■□□□ 1.89
Shroom1Q5SX79 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom1Q5SX79 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.86■■□□□ 1.89
Shroom1Q5SX79 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom1Q5SX79 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Shroom1Q5SX79 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Shroom1Q5SX79 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom1Q5SX79 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Shroom1Q5SX79 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom1Q5SX79 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom1Q5SX79 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shroom1Q5SX79 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shroom1Q5SX79 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Shroom1Q5SX79 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Shroom1Q5SX79 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.77■■□□□ 1.88
Shroom1Q5SX79 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.76■■□□□ 1.87
Shroom1Q5SX79 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Shroom1Q5SX79 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shroom1Q5SX79 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Shroom1Q5SX79 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.74■■□□□ 1.87
Shroom1Q5SX79 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shroom1Q5SX79 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Shroom1Q5SX79 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom1Q5SX79 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom1Q5SX79 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Shroom1Q5SX79 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Shroom1Q5SX79 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.67■■□□□ 1.86
Shroom1Q5SX79 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom1Q5SX79 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Shroom1Q5SX79 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.66■■□□□ 1.86
Shroom1Q5SX79 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom1Q5SX79 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom1Q5SX79 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Shroom1Q5SX79 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Shroom1Q5SX79 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom1Q5SX79 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom1Q5SX79 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Shroom1Q5SX79 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom1Q5SX79 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom1Q5SX79 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.58■■□□□ 1.85
Shroom1Q5SX79 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom1Q5SX79 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom1Q5SX79 Gm8503-201ENSMUST00000118131 455 ntBASIC26.53■■□□□ 1.84
Shroom1Q5SX79 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom1Q5SX79 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom1Q5SX79 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms