Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Shroom1Q5SX79 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shroom1Q5SX79 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Shroom1Q5SX79 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Shroom1Q5SX79 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shroom1Q5SX79 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
Shroom1Q5SX79 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shroom1Q5SX79 Gm24970-201ENSMUST00000175582 82 ntBASIC27.09■■□□□ 1.93
Shroom1Q5SX79 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Shroom1Q5SX79 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Shroom1Q5SX79 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom1Q5SX79 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom1Q5SX79 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shroom1Q5SX79 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.06■■□□□ 1.92
Shroom1Q5SX79 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom1Q5SX79 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Shroom1Q5SX79 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shroom1Q5SX79 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.03■■□□□ 1.92
Shroom1Q5SX79 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Shroom1Q5SX79 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
Shroom1Q5SX79 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.01■■□□□ 1.91
Shroom1Q5SX79 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.01■■□□□ 1.91
Shroom1Q5SX79 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shroom1Q5SX79 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Shroom1Q5SX79 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27■■□□□ 1.91
Shroom1Q5SX79 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Shroom1Q5SX79 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.99■■□□□ 1.91
Shroom1Q5SX79 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.98■■□□□ 1.91
Shroom1Q5SX79 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Shroom1Q5SX79 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Shroom1Q5SX79 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.96■■□□□ 1.91
Shroom1Q5SX79 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Shroom1Q5SX79 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
Shroom1Q5SX79 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom1Q5SX79 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom1Q5SX79 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom1Q5SX79 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom1Q5SX79 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom1Q5SX79 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom1Q5SX79 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom1Q5SX79 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom1Q5SX79 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Shroom1Q5SX79 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.88■■□□□ 1.89
Shroom1Q5SX79 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.87■■□□□ 1.89
Shroom1Q5SX79 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Shroom1Q5SX79 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.86■■□□□ 1.89
Shroom1Q5SX79 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Shroom1Q5SX79 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Shroom1Q5SX79 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Shroom1Q5SX79 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Shroom1Q5SX79 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Shroom1Q5SX79 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom1Q5SX79 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shroom1Q5SX79 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shroom1Q5SX79 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shroom1Q5SX79 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Shroom1Q5SX79 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Shroom1Q5SX79 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.77■■□□□ 1.88
Shroom1Q5SX79 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.76■■□□□ 1.87
Shroom1Q5SX79 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Shroom1Q5SX79 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shroom1Q5SX79 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Shroom1Q5SX79 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.74■■□□□ 1.87
Shroom1Q5SX79 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shroom1Q5SX79 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Shroom1Q5SX79 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom1Q5SX79 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom1Q5SX79 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Shroom1Q5SX79 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Shroom1Q5SX79 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.67■■□□□ 1.86
Shroom1Q5SX79 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom1Q5SX79 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Shroom1Q5SX79 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.66■■□□□ 1.86
Shroom1Q5SX79 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom1Q5SX79 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom1Q5SX79 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Shroom1Q5SX79 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Shroom1Q5SX79 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom1Q5SX79 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Shroom1Q5SX79 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Shroom1Q5SX79 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom1Q5SX79 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shroom1Q5SX79 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.58■■□□□ 1.85
Shroom1Q5SX79 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Shroom1Q5SX79 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shroom1Q5SX79 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.56■■□□□ 1.84
Shroom1Q5SX79 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shroom1Q5SX79 Gm8503-201ENSMUST00000118131 455 ntBASIC26.53■■□□□ 1.84
Shroom1Q5SX79 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom1Q5SX79 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom1Q5SX79 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms