Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf48Q3US17 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf48Q3US17 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Znf48Q3US17 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf48Q3US17 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.49■□□□□ 0.87
Znf48Q3US17 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Znf48Q3US17 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf48Q3US17 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.48■□□□□ 0.87
Znf48Q3US17 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.48■□□□□ 0.87
Znf48Q3US17 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Znf48Q3US17 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Znf48Q3US17 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.45■□□□□ 0.86
Znf48Q3US17 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Znf48Q3US17 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Znf48Q3US17 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Znf48Q3US17 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.43■□□□□ 0.86
Znf48Q3US17 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Znf48Q3US17 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Znf48Q3US17 Mipep-204ENSMUST00000225043 1548 ntBASIC20.43■□□□□ 0.86
Znf48Q3US17 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Znf48Q3US17 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Znf48Q3US17 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Znf48Q3US17 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Znf48Q3US17 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Znf48Q3US17 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.37■□□□□ 0.85
Znf48Q3US17 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Znf48Q3US17 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Znf48Q3US17 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Znf48Q3US17 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Znf48Q3US17 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Znf48Q3US17 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.36■□□□□ 0.85
Znf48Q3US17 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Znf48Q3US17 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
Znf48Q3US17 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.35■□□□□ 0.85
Znf48Q3US17 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Znf48Q3US17 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Znf48Q3US17 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Znf48Q3US17 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Znf48Q3US17 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.33■□□□□ 0.84
Znf48Q3US17 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Znf48Q3US17 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.3■□□□□ 0.84
Znf48Q3US17 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.29■□□□□ 0.84
Znf48Q3US17 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.29■□□□□ 0.84
Znf48Q3US17 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Znf48Q3US17 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Znf48Q3US17 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Znf48Q3US17 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Znf48Q3US17 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Znf48Q3US17 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Znf48Q3US17 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Znf48Q3US17 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Znf48Q3US17 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Znf48Q3US17 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Znf48Q3US17 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Znf48Q3US17 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf48Q3US17 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.2■□□□□ 0.82
Znf48Q3US17 Gm24970-201ENSMUST00000175582 82 ntBASIC20.19■□□□□ 0.82
Znf48Q3US17 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.19■□□□□ 0.82
Znf48Q3US17 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf48Q3US17 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Znf48Q3US17 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf48Q3US17 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf48Q3US17 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.15■□□□□ 0.82
Znf48Q3US17 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf48Q3US17 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf48Q3US17 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf48Q3US17 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf48Q3US17 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.13■□□□□ 0.81
Znf48Q3US17 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Znf48Q3US17 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.13■□□□□ 0.81
Znf48Q3US17 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Znf48Q3US17 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Znf48Q3US17 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Znf48Q3US17 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf48Q3US17 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf48Q3US17 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Znf48Q3US17 Gm8503-201ENSMUST00000118131 455 ntBASIC20.09■□□□□ 0.81
Znf48Q3US17 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Znf48Q3US17 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Znf48Q3US17 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Znf48Q3US17 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Znf48Q3US17 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Znf48Q3US17 Gm6821-201ENSMUST00000107540 542 ntBASIC20.05■□□□□ 0.8
Znf48Q3US17 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.05■□□□□ 0.8
Znf48Q3US17 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Znf48Q3US17 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Znf48Q3US17 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.05■□□□□ 0.8
Znf48Q3US17 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Znf48Q3US17 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf48Q3US17 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.03■□□□□ 0.8
Znf48Q3US17 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf48Q3US17 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.02■□□□□ 0.8
Znf48Q3US17 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf48Q3US17 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Znf48Q3US17 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Znf48Q3US17 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Znf48Q3US17 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.01■□□□□ 0.79
Znf48Q3US17 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Znf48Q3US17 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
Znf48Q3US17 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms