Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Lins1Q3U1D0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Lins1Q3U1D0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Lins1Q3U1D0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Lins1Q3U1D0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.54■■■□□ 2.48
Lins1Q3U1D0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Lins1Q3U1D0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Lins1Q3U1D0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Lins1Q3U1D0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.52■■■□□ 2.48
Lins1Q3U1D0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.51■■■□□ 2.47
Lins1Q3U1D0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Lins1Q3U1D0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Lins1Q3U1D0 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.49■■■□□ 2.47
Lins1Q3U1D0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Lins1Q3U1D0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Lins1Q3U1D0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Lins1Q3U1D0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lins1Q3U1D0 Gm24970-201ENSMUST00000175582 82 ntBASIC30.47■■■□□ 2.47
Lins1Q3U1D0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.46■■■□□ 2.47
Lins1Q3U1D0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Lins1Q3U1D0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.46■■■□□ 2.47
Lins1Q3U1D0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.45■■■□□ 2.47
Lins1Q3U1D0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.45■■■□□ 2.46
Lins1Q3U1D0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.45■■■□□ 2.46
Lins1Q3U1D0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Lins1Q3U1D0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Lins1Q3U1D0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
Lins1Q3U1D0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Lins1Q3U1D0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Lins1Q3U1D0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Lins1Q3U1D0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Lins1Q3U1D0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Lins1Q3U1D0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Lins1Q3U1D0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Lins1Q3U1D0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Lins1Q3U1D0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Lins1Q3U1D0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.35■■■□□ 2.45
Lins1Q3U1D0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
Lins1Q3U1D0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Lins1Q3U1D0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Lins1Q3U1D0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Lins1Q3U1D0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Lins1Q3U1D0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Lins1Q3U1D0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Lins1Q3U1D0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Lins1Q3U1D0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Lins1Q3U1D0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.27■■■□□ 2.44
Lins1Q3U1D0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Lins1Q3U1D0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Lins1Q3U1D0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Lins1Q3U1D0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Lins1Q3U1D0 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.22■■■□□ 2.43
Lins1Q3U1D0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.22■■■□□ 2.43
Lins1Q3U1D0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.21■■■□□ 2.43
Lins1Q3U1D0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lins1Q3U1D0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Lins1Q3U1D0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Lins1Q3U1D0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Lins1Q3U1D0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Lins1Q3U1D0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Lins1Q3U1D0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.16■■■□□ 2.42
Lins1Q3U1D0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Lins1Q3U1D0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Lins1Q3U1D0 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.12■■■□□ 2.41
Lins1Q3U1D0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Lins1Q3U1D0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Lins1Q3U1D0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Lins1Q3U1D0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Lins1Q3U1D0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Lins1Q3U1D0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Lins1Q3U1D0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Lins1Q3U1D0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Lins1Q3U1D0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Lins1Q3U1D0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Lins1Q3U1D0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.04■■■□□ 2.4
Lins1Q3U1D0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
Lins1Q3U1D0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Lins1Q3U1D0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Lins1Q3U1D0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Lins1Q3U1D0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
Lins1Q3U1D0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lins1Q3U1D0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lins1Q3U1D0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lins1Q3U1D0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30■■■□□ 2.39
Lins1Q3U1D0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.99■■■□□ 2.39
Lins1Q3U1D0 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.99■■■□□ 2.39
Lins1Q3U1D0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Lins1Q3U1D0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Lins1Q3U1D0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Lins1Q3U1D0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Lins1Q3U1D0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Lins1Q3U1D0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Lins1Q3U1D0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
Lins1Q3U1D0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Lins1Q3U1D0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Lins1Q3U1D0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Lins1Q3U1D0 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.9■■■□□ 2.38
Lins1Q3U1D0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.89■■■□□ 2.38
Lins1Q3U1D0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.89■■■□□ 2.38
Lins1Q3U1D0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms