Protein–RNA interactions for Protein: P28311

Defa4, Alpha-defensin 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa4P28311 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Defa4P28311 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Defa4P28311 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Defa4P28311 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Defa4P28311 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Defa4P28311 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Defa4P28311 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Defa4P28311 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Defa4P28311 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Defa4P28311 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Defa4P28311 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Defa4P28311 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Defa4P28311 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Defa4P28311 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Defa4P28311 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Defa4P28311 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Defa4P28311 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Defa4P28311 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Defa4P28311 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Defa4P28311 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Defa4P28311 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Defa4P28311 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.89■□□□□ 0.29
Defa4P28311 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.89■□□□□ 0.29
Defa4P28311 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.89■□□□□ 0.29
Defa4P28311 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Defa4P28311 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Defa4P28311 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Defa4P28311 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Defa4P28311 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Defa4P28311 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Defa4P28311 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Defa4P28311 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Defa4P28311 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Defa4P28311 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Defa4P28311 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Defa4P28311 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Defa4P28311 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Defa4P28311 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Defa4P28311 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Defa4P28311 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Defa4P28311 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Defa4P28311 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Defa4P28311 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Defa4P28311 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Defa4P28311 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Defa4P28311 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Defa4P28311 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Defa4P28311 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Defa4P28311 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Defa4P28311 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Defa4P28311 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Defa4P28311 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.77■□□□□ 0.28
Defa4P28311 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Defa4P28311 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.76■□□□□ 0.27
Defa4P28311 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.75■□□□□ 0.27
Defa4P28311 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Defa4P28311 Gm25262-201ENSMUST00000174934 133 ntBASIC16.74■□□□□ 0.27
Defa4P28311 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Defa4P28311 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Defa4P28311 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Defa4P28311 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Defa4P28311 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Defa4P28311 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Defa4P28311 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Defa4P28311 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Defa4P28311 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Defa4P28311 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Defa4P28311 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.71■□□□□ 0.27
Defa4P28311 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Defa4P28311 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Defa4P28311 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Defa4P28311 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Defa4P28311 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.7■□□□□ 0.26
Defa4P28311 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Defa4P28311 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.69■□□□□ 0.26
Defa4P28311 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Defa4P28311 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Defa4P28311 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Defa4P28311 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Defa4P28311 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Defa4P28311 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Defa4P28311 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Defa4P28311 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Defa4P28311 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Defa4P28311 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Defa4P28311 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Defa4P28311 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Defa4P28311 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Defa4P28311 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Defa4P28311 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Defa4P28311 Mipep-204ENSMUST00000225043 1548 ntBASIC16.62■□□□□ 0.25
Defa4P28311 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Defa4P28311 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Defa4P28311 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.62■□□□□ 0.25
Defa4P28311 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.61■□□□□ 0.25
Defa4P28311 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Defa4P28311 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Defa4P28311 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Defa4P28311 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Defa4P28311 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms