Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PrnpP04925 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PrnpP04925 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
PrnpP04925 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PrnpP04925 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PrnpP04925 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.11■■□□□ 1.93
PrnpP04925 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.11■■□□□ 1.93
PrnpP04925 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.1■■□□□ 1.93
PrnpP04925 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PrnpP04925 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PrnpP04925 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PrnpP04925 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PrnpP04925 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PrnpP04925 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PrnpP04925 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PrnpP04925 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PrnpP04925 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PrnpP04925 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.03■■□□□ 1.92
PrnpP04925 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PrnpP04925 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.91
PrnpP04925 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
PrnpP04925 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
PrnpP04925 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PrnpP04925 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PrnpP04925 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PrnpP04925 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.94■■□□□ 1.9
PrnpP04925 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PrnpP04925 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PrnpP04925 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
PrnpP04925 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PrnpP04925 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PrnpP04925 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.89■■□□□ 1.9
PrnpP04925 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PrnpP04925 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PrnpP04925 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.85■■□□□ 1.89
PrnpP04925 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.85■■□□□ 1.89
PrnpP04925 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.83■■□□□ 1.89
PrnpP04925 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PrnpP04925 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
PrnpP04925 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PrnpP04925 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PrnpP04925 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PrnpP04925 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PrnpP04925 Gm8503-201ENSMUST00000118131 455 ntBASIC26.78■■□□□ 1.88
PrnpP04925 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PrnpP04925 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
PrnpP04925 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PrnpP04925 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.77■■□□□ 1.88
PrnpP04925 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.77■■□□□ 1.88
PrnpP04925 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
PrnpP04925 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PrnpP04925 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PrnpP04925 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.75■■□□□ 1.87
PrnpP04925 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.74■■□□□ 1.87
PrnpP04925 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
PrnpP04925 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PrnpP04925 Gm6821-201ENSMUST00000107540 542 ntBASIC26.72■■□□□ 1.87
PrnpP04925 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PrnpP04925 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PrnpP04925 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PrnpP04925 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PrnpP04925 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PrnpP04925 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PrnpP04925 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PrnpP04925 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PrnpP04925 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PrnpP04925 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.69■■□□□ 1.86
PrnpP04925 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
PrnpP04925 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PrnpP04925 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
PrnpP04925 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.66■■□□□ 1.86
PrnpP04925 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PrnpP04925 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PrnpP04925 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PrnpP04925 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
PrnpP04925 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
PrnpP04925 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PrnpP04925 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PrnpP04925 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PrnpP04925 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PrnpP04925 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PrnpP04925 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PrnpP04925 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
PrnpP04925 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PrnpP04925 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PrnpP04925 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PrnpP04925 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PrnpP04925 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PrnpP04925 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PrnpP04925 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PrnpP04925 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.51■■□□□ 1.83
PrnpP04925 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PrnpP04925 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.51■■□□□ 1.83
PrnpP04925 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PrnpP04925 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.49■■□□□ 1.83
PrnpP04925 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PrnpP04925 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.48■■□□□ 1.83
PrnpP04925 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PrnpP04925 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PrnpP04925 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.47■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms