Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Pdlim1O70400 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
Pdlim1O70400 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Pdlim1O70400 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pdlim1O70400 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
Pdlim1O70400 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pdlim1O70400 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim1O70400 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim1O70400 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim1O70400 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pdlim1O70400 Zfp131-205ENSMUST00000223812 663 ntBASIC25.21■■□□□ 1.63
Pdlim1O70400 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pdlim1O70400 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.19■■□□□ 1.62
Pdlim1O70400 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pdlim1O70400 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.17■■□□□ 1.62
Pdlim1O70400 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.17■■□□□ 1.62
Pdlim1O70400 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim1O70400 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pdlim1O70400 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Pdlim1O70400 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pdlim1O70400 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim1O70400 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim1O70400 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim1O70400 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.15■■□□□ 1.62
Pdlim1O70400 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pdlim1O70400 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pdlim1O70400 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pdlim1O70400 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Pdlim1O70400 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pdlim1O70400 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Pdlim1O70400 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Pdlim1O70400 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pdlim1O70400 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pdlim1O70400 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Pdlim1O70400 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pdlim1O70400 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pdlim1O70400 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.04■■□□□ 1.6
Pdlim1O70400 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pdlim1O70400 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pdlim1O70400 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pdlim1O70400 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.02■■□□□ 1.6
Pdlim1O70400 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pdlim1O70400 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.02■■□□□ 1.6
Pdlim1O70400 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pdlim1O70400 Tdp2-203ENSMUST00000223804 1136 ntBASIC25■■□□□ 1.59
Pdlim1O70400 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pdlim1O70400 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pdlim1O70400 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pdlim1O70400 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pdlim1O70400 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Pdlim1O70400 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
Pdlim1O70400 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.97■■□□□ 1.59
Pdlim1O70400 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Pdlim1O70400 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pdlim1O70400 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pdlim1O70400 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.95■■□□□ 1.58
Pdlim1O70400 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.95■■□□□ 1.58
Pdlim1O70400 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.94■■□□□ 1.58
Pdlim1O70400 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pdlim1O70400 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Pdlim1O70400 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pdlim1O70400 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pdlim1O70400 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pdlim1O70400 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pdlim1O70400 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pdlim1O70400 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pdlim1O70400 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pdlim1O70400 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pdlim1O70400 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pdlim1O70400 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pdlim1O70400 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pdlim1O70400 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pdlim1O70400 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pdlim1O70400 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.85■■□□□ 1.57
Pdlim1O70400 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Pdlim1O70400 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pdlim1O70400 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pdlim1O70400 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pdlim1O70400 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pdlim1O70400 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pdlim1O70400 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Pdlim1O70400 Gm9397-201ENSMUST00000200125 605 ntBASIC24.8■■□□□ 1.56
Pdlim1O70400 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pdlim1O70400 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.79■■□□□ 1.56
Pdlim1O70400 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pdlim1O70400 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.78■■□□□ 1.56
Pdlim1O70400 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.78■■□□□ 1.56
Pdlim1O70400 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pdlim1O70400 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pdlim1O70400 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pdlim1O70400 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pdlim1O70400 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pdlim1O70400 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.76■■□□□ 1.55
Pdlim1O70400 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pdlim1O70400 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pdlim1O70400 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pdlim1O70400 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pdlim1O70400 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Pdlim1O70400 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pdlim1O70400 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms