Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.34■■□□□ 1.81
Ptch2O35595 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptch2O35595 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptch2O35595 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptch2O35595 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Ptch2O35595 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ptch2O35595 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.32■■□□□ 1.8
Ptch2O35595 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
Ptch2O35595 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptch2O35595 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ptch2O35595 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Ptch2O35595 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.29■■□□□ 1.8
Ptch2O35595 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ptch2O35595 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptch2O35595 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ptch2O35595 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptch2O35595 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.25■■□□□ 1.79
Ptch2O35595 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptch2O35595 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch2O35595 Gm24970-201ENSMUST00000175582 82 ntBASIC26.22■■□□□ 1.79
Ptch2O35595 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.22■■□□□ 1.79
Ptch2O35595 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptch2O35595 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ptch2O35595 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.19■■□□□ 1.78
Ptch2O35595 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch2O35595 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.19■■□□□ 1.78
Ptch2O35595 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptch2O35595 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ptch2O35595 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Ptch2O35595 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptch2O35595 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch2O35595 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptch2O35595 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch2O35595 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch2O35595 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ptch2O35595 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptch2O35595 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptch2O35595 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptch2O35595 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch2O35595 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ptch2O35595 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ptch2O35595 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ptch2O35595 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ptch2O35595 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ptch2O35595 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.07■■□□□ 1.76
Ptch2O35595 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch2O35595 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ptch2O35595 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ptch2O35595 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.03■■□□□ 1.76
Ptch2O35595 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.02■■□□□ 1.76
Ptch2O35595 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.01■■□□□ 1.75
Ptch2O35595 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.01■■□□□ 1.75
Ptch2O35595 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26■■□□□ 1.75
Ptch2O35595 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26■■□□□ 1.75
Ptch2O35595 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ptch2O35595 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Ptch2O35595 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ptch2O35595 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Ptch2O35595 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch2O35595 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Ptch2O35595 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ptch2O35595 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ptch2O35595 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ptch2O35595 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.92■■□□□ 1.74
Ptch2O35595 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
Ptch2O35595 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ptch2O35595 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.88■■□□□ 1.73
Ptch2O35595 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.88■■□□□ 1.73
Ptch2O35595 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ptch2O35595 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
Ptch2O35595 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ptch2O35595 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Ptch2O35595 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ptch2O35595 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ptch2O35595 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ptch2O35595 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ptch2O35595 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch2O35595 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Ptch2O35595 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch2O35595 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch2O35595 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch2O35595 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch2O35595 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.84■■□□□ 1.73
Ptch2O35595 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ptch2O35595 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ptch2O35595 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ptch2O35595 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Ptch2O35595 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.8■■□□□ 1.72
Ptch2O35595 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.8■■□□□ 1.72
Ptch2O35595 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Ptch2O35595 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Ptch2O35595 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.77■■□□□ 1.72
Ptch2O35595 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ptch2O35595 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ptch2O35595 Gm8503-201ENSMUST00000118131 455 ntBASIC25.74■■□□□ 1.71
Ptch2O35595 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.74■■□□□ 1.71
Ptch2O35595 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ptch2O35595 Gm6821-201ENSMUST00000107540 542 ntBASIC25.72■■□□□ 1.71
Ptch2O35595 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
Ptch2O35595 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.7■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms