Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ebf3O08791 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ebf3O08791 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ebf3O08791 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.43■■□□□ 1.82
Ebf3O08791 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Ebf3O08791 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Ebf3O08791 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ebf3O08791 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
Ebf3O08791 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ebf3O08791 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.35■■□□□ 1.81
Ebf3O08791 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ebf3O08791 Gm24970-201ENSMUST00000175582 82 ntBASIC26.34■■□□□ 1.81
Ebf3O08791 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ebf3O08791 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ebf3O08791 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Ebf3O08791 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ebf3O08791 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Ebf3O08791 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.32■■□□□ 1.8
Ebf3O08791 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ebf3O08791 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.3■■□□□ 1.8
Ebf3O08791 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ebf3O08791 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ebf3O08791 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.28■■□□□ 1.8
Ebf3O08791 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ebf3O08791 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ebf3O08791 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ebf3O08791 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ebf3O08791 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ebf3O08791 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ebf3O08791 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ebf3O08791 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ebf3O08791 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Ebf3O08791 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Ebf3O08791 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.24■■□□□ 1.79
Ebf3O08791 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.23■■□□□ 1.79
Ebf3O08791 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ebf3O08791 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ebf3O08791 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ebf3O08791 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.19■■□□□ 1.78
Ebf3O08791 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Ebf3O08791 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ebf3O08791 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ebf3O08791 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ebf3O08791 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ebf3O08791 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ebf3O08791 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ebf3O08791 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
Ebf3O08791 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ebf3O08791 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ebf3O08791 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.07■■□□□ 1.76
Ebf3O08791 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.06■■□□□ 1.76
Ebf3O08791 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.05■■□□□ 1.76
Ebf3O08791 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Ebf3O08791 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ebf3O08791 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ebf3O08791 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ebf3O08791 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ebf3O08791 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.01■■□□□ 1.75
Ebf3O08791 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ebf3O08791 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Ebf3O08791 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ebf3O08791 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26■■□□□ 1.75
Ebf3O08791 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ebf3O08791 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ebf3O08791 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.98■■□□□ 1.75
Ebf3O08791 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ebf3O08791 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
Ebf3O08791 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.96■■□□□ 1.75
Ebf3O08791 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
Ebf3O08791 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.94■■□□□ 1.74
Ebf3O08791 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ebf3O08791 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ebf3O08791 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ebf3O08791 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ebf3O08791 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ebf3O08791 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ebf3O08791 Zxda-201ENSMUST00000117281 2621 ntBASIC25.91■■□□□ 1.74
Ebf3O08791 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ebf3O08791 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Ebf3O08791 Gm8503-201ENSMUST00000118131 455 ntBASIC25.9■■□□□ 1.74
Ebf3O08791 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Ebf3O08791 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ebf3O08791 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.89■■□□□ 1.74
Ebf3O08791 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.88■■□□□ 1.73
Ebf3O08791 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ebf3O08791 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ebf3O08791 Gm6821-201ENSMUST00000107540 542 ntBASIC25.87■■□□□ 1.73
Ebf3O08791 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ebf3O08791 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ebf3O08791 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ebf3O08791 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ebf3O08791 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ebf3O08791 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ebf3O08791 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ebf3O08791 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ebf3O08791 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.85■■□□□ 1.73
Ebf3O08791 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ebf3O08791 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ebf3O08791 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ebf3O08791 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms