Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Gm5580A0A0N4SVP8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Gm5580A0A0N4SVP8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Gm5580A0A0N4SVP8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Gm5580A0A0N4SVP8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Gm5580A0A0N4SVP8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Gm5580A0A0N4SVP8 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.6■■■□□ 2.01
Gm5580A0A0N4SVP8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Gm5580A0A0N4SVP8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Gm5580A0A0N4SVP8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Gm5580A0A0N4SVP8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.58■■■□□ 2.01
Gm5580A0A0N4SVP8 Amer2-203ENSMUST00000225247 2662 ntBASIC27.57■■■□□ 2
Gm5580A0A0N4SVP8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Gm5580A0A0N4SVP8 Gm8109-201ENSMUST00000194076 746 ntBASIC27.57■■■□□ 2
Gm5580A0A0N4SVP8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.55■■■□□ 2
Gm5580A0A0N4SVP8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.55■■■□□ 2
Gm5580A0A0N4SVP8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.54■■■□□ 2
Gm5580A0A0N4SVP8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Gm5580A0A0N4SVP8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
Gm5580A0A0N4SVP8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Gm5580A0A0N4SVP8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
Gm5580A0A0N4SVP8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Gm5580A0A0N4SVP8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.51■■□□□ 1.99
Gm5580A0A0N4SVP8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm5580A0A0N4SVP8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Gm5580A0A0N4SVP8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
Gm5580A0A0N4SVP8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Gm5580A0A0N4SVP8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.49■■□□□ 1.99
Gm5580A0A0N4SVP8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Gm5580A0A0N4SVP8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gm5580A0A0N4SVP8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gm5580A0A0N4SVP8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm5580A0A0N4SVP8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm5580A0A0N4SVP8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm5580A0A0N4SVP8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Gm5580A0A0N4SVP8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Gm5580A0A0N4SVP8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Gm5580A0A0N4SVP8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Gm5580A0A0N4SVP8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm5580A0A0N4SVP8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Gm5580A0A0N4SVP8 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.4■■□□□ 1.98
Gm5580A0A0N4SVP8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm5580A0A0N4SVP8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm5580A0A0N4SVP8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.39■■□□□ 1.98
Gm5580A0A0N4SVP8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Gm5580A0A0N4SVP8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Gm5580A0A0N4SVP8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.36■■□□□ 1.97
Gm5580A0A0N4SVP8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.36■■□□□ 1.97
Gm5580A0A0N4SVP8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Gm5580A0A0N4SVP8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Gm5580A0A0N4SVP8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Gm5580A0A0N4SVP8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.34■■□□□ 1.97
Gm5580A0A0N4SVP8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.34■■□□□ 1.97
Gm5580A0A0N4SVP8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Gm5580A0A0N4SVP8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Gm5580A0A0N4SVP8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Gm5580A0A0N4SVP8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Gm5580A0A0N4SVP8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Gm5580A0A0N4SVP8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm5580A0A0N4SVP8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Gm5580A0A0N4SVP8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Gm5580A0A0N4SVP8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm5580A0A0N4SVP8 Peli2-204ENSMUST00000226513 1320 ntBASIC27.24■■□□□ 1.95
Gm5580A0A0N4SVP8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Gm5580A0A0N4SVP8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm5580A0A0N4SVP8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm5580A0A0N4SVP8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.23■■□□□ 1.95
Gm5580A0A0N4SVP8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Gm5580A0A0N4SVP8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Gm5580A0A0N4SVP8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Gm5580A0A0N4SVP8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Gm5580A0A0N4SVP8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Gm5580A0A0N4SVP8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Gm5580A0A0N4SVP8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.2■■□□□ 1.95
Gm5580A0A0N4SVP8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Gm5580A0A0N4SVP8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm5580A0A0N4SVP8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm5580A0A0N4SVP8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm5580A0A0N4SVP8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm5580A0A0N4SVP8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Gm5580A0A0N4SVP8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Gm5580A0A0N4SVP8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Gm5580A0A0N4SVP8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.13■■□□□ 1.93
Gm5580A0A0N4SVP8 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.13■■□□□ 1.93
Gm5580A0A0N4SVP8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Gm5580A0A0N4SVP8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Gm5580A0A0N4SVP8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Gm5580A0A0N4SVP8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Gm5580A0A0N4SVP8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Gm5580A0A0N4SVP8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Gm5580A0A0N4SVP8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gm5580A0A0N4SVP8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Gm5580A0A0N4SVP8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gm5580A0A0N4SVP8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Gm5580A0A0N4SVP8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Gm5580A0A0N4SVP8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Gm5580A0A0N4SVP8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Gm5580A0A0N4SVP8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm5580A0A0N4SVP8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm5580A0A0N4SVP8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms