Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav9-4A0A0B4J1K2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9-4A0A0B4J1K2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav9-4A0A0B4J1K2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav9-4A0A0B4J1K2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19■□□□□ 0.63
Trav9-4A0A0B4J1K2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav9-4A0A0B4J1K2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trav9-4A0A0B4J1K2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav9-4A0A0B4J1K2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.99■□□□□ 0.63
Trav9-4A0A0B4J1K2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9-4A0A0B4J1K2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9-4A0A0B4J1K2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9-4A0A0B4J1K2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9-4A0A0B4J1K2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.97■□□□□ 0.63
Trav9-4A0A0B4J1K2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9-4A0A0B4J1K2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Trav9-4A0A0B4J1K2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav9-4A0A0B4J1K2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Trav9-4A0A0B4J1K2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav9-4A0A0B4J1K2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trav9-4A0A0B4J1K2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9-4A0A0B4J1K2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9-4A0A0B4J1K2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9-4A0A0B4J1K2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9-4A0A0B4J1K2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trav9-4A0A0B4J1K2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9-4A0A0B4J1K2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav9-4A0A0B4J1K2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trav9-4A0A0B4J1K2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav9-4A0A0B4J1K2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav9-4A0A0B4J1K2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-4A0A0B4J1K2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-4A0A0B4J1K2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trav9-4A0A0B4J1K2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-4A0A0B4J1K2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-4A0A0B4J1K2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-4A0A0B4J1K2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.86■□□□□ 0.61
Trav9-4A0A0B4J1K2 Zfp131-205ENSMUST00000223812 663 ntBASIC18.86■□□□□ 0.61
Trav9-4A0A0B4J1K2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-4A0A0B4J1K2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav9-4A0A0B4J1K2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav9-4A0A0B4J1K2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav9-4A0A0B4J1K2 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.85■□□□□ 0.61
Trav9-4A0A0B4J1K2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav9-4A0A0B4J1K2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9-4A0A0B4J1K2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav9-4A0A0B4J1K2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav9-4A0A0B4J1K2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav9-4A0A0B4J1K2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav9-4A0A0B4J1K2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav9-4A0A0B4J1K2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav9-4A0A0B4J1K2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav9-4A0A0B4J1K2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9-4A0A0B4J1K2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav9-4A0A0B4J1K2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav9-4A0A0B4J1K2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.78■□□□□ 0.6
Trav9-4A0A0B4J1K2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav9-4A0A0B4J1K2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9-4A0A0B4J1K2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.76■□□□□ 0.59
Trav9-4A0A0B4J1K2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav9-4A0A0B4J1K2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-4A0A0B4J1K2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trav9-4A0A0B4J1K2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-4A0A0B4J1K2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav9-4A0A0B4J1K2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.73■□□□□ 0.59
Trav9-4A0A0B4J1K2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trav9-4A0A0B4J1K2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav9-4A0A0B4J1K2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav9-4A0A0B4J1K2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav9-4A0A0B4J1K2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav9-4A0A0B4J1K2 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.7■□□□□ 0.58
Trav9-4A0A0B4J1K2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav9-4A0A0B4J1K2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav9-4A0A0B4J1K2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav9-4A0A0B4J1K2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trav9-4A0A0B4J1K2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav9-4A0A0B4J1K2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trav9-4A0A0B4J1K2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-4A0A0B4J1K2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-4A0A0B4J1K2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-4A0A0B4J1K2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-4A0A0B4J1K2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-4A0A0B4J1K2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav9-4A0A0B4J1K2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav9-4A0A0B4J1K2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav9-4A0A0B4J1K2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav9-4A0A0B4J1K2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav9-4A0A0B4J1K2 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.64■□□□□ 0.57
Trav9-4A0A0B4J1K2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav9-4A0A0B4J1K2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav9-4A0A0B4J1K2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9-4A0A0B4J1K2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9-4A0A0B4J1K2 Zxda-201ENSMUST00000117281 2621 ntBASIC18.61■□□□□ 0.57
Trav9-4A0A0B4J1K2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9-4A0A0B4J1K2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav9-4A0A0B4J1K2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav9-4A0A0B4J1K2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav9-4A0A0B4J1K2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav9-4A0A0B4J1K2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav9-4A0A0B4J1K2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms