Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Trav6n-7A0A075B6A6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21,59■■□□□ 1,05
Trav6n-7A0A075B6A6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21,58■■□□□ 1,05
Trav6n-7A0A075B6A6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21,58■■□□□ 1,04
Trav6n-7A0A075B6A6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Trav6n-7A0A075B6A6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21,57■■□□□ 1,04
Trav6n-7A0A075B6A6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21,56■■□□□ 1,04
Trav6n-7A0A075B6A6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21,56■■□□□ 1,04
Trav6n-7A0A075B6A6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21,56■■□□□ 1,04
Trav6n-7A0A075B6A6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Trav6n-7A0A075B6A6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21,53■■□□□ 1,04
Trav6n-7A0A075B6A6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
Trav6n-7A0A075B6A6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21,52■■□□□ 1,04
Trav6n-7A0A075B6A6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21,52■■□□□ 1,04
Trav6n-7A0A075B6A6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21,51■■□□□ 1,03
Trav6n-7A0A075B6A6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21,51■■□□□ 1,03
Trav6n-7A0A075B6A6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Trav6n-7A0A075B6A6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21,49■■□□□ 1,03
Trav6n-7A0A075B6A6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Trav6n-7A0A075B6A6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Trav6n-7A0A075B6A6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21,48■■□□□ 1,03
Trav6n-7A0A075B6A6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,48■■□□□ 1,03
Trav6n-7A0A075B6A6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21,48■■□□□ 1,03
Trav6n-7A0A075B6A6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Trav6n-7A0A075B6A6 Zfp131-205ENSMUST00000223812 663 ntBASIC21,47■■□□□ 1,03
Trav6n-7A0A075B6A6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21,47■■□□□ 1,03
Trav6n-7A0A075B6A6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21,46■■□□□ 1,03
Trav6n-7A0A075B6A6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21,46■■□□□ 1,03
Trav6n-7A0A075B6A6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Trav6n-7A0A075B6A6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Trav6n-7A0A075B6A6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21,45■■□□□ 1,02
Trav6n-7A0A075B6A6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21,45■■□□□ 1,02
Trav6n-7A0A075B6A6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,44■■□□□ 1,02
Trav6n-7A0A075B6A6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21,44■■□□□ 1,02
Trav6n-7A0A075B6A6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21,43■■□□□ 1,02
Trav6n-7A0A075B6A6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21,43■■□□□ 1,02
Trav6n-7A0A075B6A6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Trav6n-7A0A075B6A6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21,41■■□□□ 1,02
Trav6n-7A0A075B6A6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21,41■■□□□ 1,02
Trav6n-7A0A075B6A6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21,41■■□□□ 1,02
Trav6n-7A0A075B6A6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21,4■■□□□ 1,02
Trav6n-7A0A075B6A6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,02
Trav6n-7A0A075B6A6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21,39■■□□□ 1,01
Trav6n-7A0A075B6A6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Trav6n-7A0A075B6A6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21,38■■□□□ 1,01
Trav6n-7A0A075B6A6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Trav6n-7A0A075B6A6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,36■■□□□ 1,01
Trav6n-7A0A075B6A6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Trav6n-7A0A075B6A6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21,36■■□□□ 1,01
Trav6n-7A0A075B6A6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Trav6n-7A0A075B6A6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Trav6n-7A0A075B6A6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Trav6n-7A0A075B6A6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21,34■■□□□ 1,01
Trav6n-7A0A075B6A6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21,33■■□□□ 1,01
Trav6n-7A0A075B6A6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21,32■■□□□ 1
Trav6n-7A0A075B6A6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21,31■■□□□ 1
Trav6n-7A0A075B6A6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Trav6n-7A0A075B6A6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21,31■■□□□ 1
Trav6n-7A0A075B6A6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21,29■■□□□ 1
Trav6n-7A0A075B6A6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Trav6n-7A0A075B6A6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Trav6n-7A0A075B6A6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21,28■■□□□ 1
Trav6n-7A0A075B6A6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Trav6n-7A0A075B6A6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21,28■■□□□ 1
Trav6n-7A0A075B6A6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,28■■□□□ 1
Trav6n-7A0A075B6A6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21,27■■□□□ 1
Trav6n-7A0A075B6A6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Trav6n-7A0A075B6A6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav6n-7A0A075B6A6 Tdp2-203ENSMUST00000223804 1136 ntBASIC21,25■□□□□ 0,99
Trav6n-7A0A075B6A6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav6n-7A0A075B6A6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21,24■□□□□ 0,99
Trav6n-7A0A075B6A6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Trav6n-7A0A075B6A6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Trav6n-7A0A075B6A6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21,22■□□□□ 0,99
Trav6n-7A0A075B6A6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21,22■□□□□ 0,99
Trav6n-7A0A075B6A6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21,22■□□□□ 0,99
Trav6n-7A0A075B6A6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Trav6n-7A0A075B6A6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Trav6n-7A0A075B6A6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21,21■□□□□ 0,99
Trav6n-7A0A075B6A6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Trav6n-7A0A075B6A6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,2■□□□□ 0,98
Trav6n-7A0A075B6A6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Trav6n-7A0A075B6A6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Trav6n-7A0A075B6A6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Trav6n-7A0A075B6A6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21,18■□□□□ 0,98
Trav6n-7A0A075B6A6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21,17■□□□□ 0,98
Trav6n-7A0A075B6A6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Trav6n-7A0A075B6A6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Trav6n-7A0A075B6A6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21,14■□□□□ 0,98
Trav6n-7A0A075B6A6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21,14■□□□□ 0,98
Trav6n-7A0A075B6A6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21,14■□□□□ 0,97
Trav6n-7A0A075B6A6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Trav6n-7A0A075B6A6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21,12■□□□□ 0,97
Trav6n-7A0A075B6A6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21,12■□□□□ 0,97
Trav6n-7A0A075B6A6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav6n-7A0A075B6A6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav6n-7A0A075B6A6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21,11■□□□□ 0,97
Trav6n-7A0A075B6A6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21,11■□□□□ 0,97
Trav6n-7A0A075B6A6 Zxda-201ENSMUST00000117281 2621 ntBASIC21,1■□□□□ 0,97
Trav6n-7A0A075B6A6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21,1■□□□□ 0,97
Retrieved 100 of 76,532 protein–RNA pairs in 28,1 ms