Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav16nA0A075B634 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav16nA0A075B634 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav16nA0A075B634 Amer2-203ENSMUST00000225247 2662 ntBASIC18.94■□□□□ 0.62
Trav16nA0A075B634 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Trav16nA0A075B634 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav16nA0A075B634 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trav16nA0A075B634 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16nA0A075B634 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav16nA0A075B634 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trav16nA0A075B634 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16nA0A075B634 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16nA0A075B634 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16nA0A075B634 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16nA0A075B634 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16nA0A075B634 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav16nA0A075B634 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.8■□□□□ 0.6
Trav16nA0A075B634 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav16nA0A075B634 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16nA0A075B634 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16nA0A075B634 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16nA0A075B634 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav16nA0A075B634 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav16nA0A075B634 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav16nA0A075B634 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trav16nA0A075B634 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16nA0A075B634 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16nA0A075B634 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16nA0A075B634 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16nA0A075B634 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav16nA0A075B634 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav16nA0A075B634 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16nA0A075B634 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16nA0A075B634 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16nA0A075B634 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav16nA0A075B634 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.63■□□□□ 0.57
Trav16nA0A075B634 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav16nA0A075B634 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Trav16nA0A075B634 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav16nA0A075B634 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav16nA0A075B634 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Trav16nA0A075B634 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav16nA0A075B634 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.6■□□□□ 0.57
Trav16nA0A075B634 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.6■□□□□ 0.57
Trav16nA0A075B634 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav16nA0A075B634 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav16nA0A075B634 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav16nA0A075B634 Gm25262-201ENSMUST00000174934 133 ntBASIC18.57■□□□□ 0.56
Trav16nA0A075B634 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav16nA0A075B634 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms