Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.66□□□□□ -0.06
PdfS4R2K0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
PdfS4R2K0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.65□□□□□ -0.06
PdfS4R2K0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PdfS4R2K0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PdfS4R2K0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 Golph3-205ENSMUST00000228671 2842 ntBASIC14.65□□□□□ -0.06
PdfS4R2K0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PdfS4R2K0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PdfS4R2K0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.64□□□□□ -0.07
PdfS4R2K0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.64□□□□□ -0.07
PdfS4R2K0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.64□□□□□ -0.07
PdfS4R2K0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PdfS4R2K0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.63□□□□□ -0.07
PdfS4R2K0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PdfS4R2K0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PdfS4R2K0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.62□□□□□ -0.07
PdfS4R2K0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.62□□□□□ -0.07
PdfS4R2K0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.62□□□□□ -0.07
PdfS4R2K0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PdfS4R2K0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.61□□□□□ -0.07
PdfS4R2K0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PdfS4R2K0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PdfS4R2K0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms