Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.35■□□□□ 0.53
Vps29Q9QZ88 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps29Q9QZ88 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps29Q9QZ88 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps29Q9QZ88 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps29Q9QZ88 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps29Q9QZ88 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Gm8493-201ENSMUST00000196881 489 ntBASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps29Q9QZ88 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Smad6-203ENSMUST00000179458 273 ntBASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Gm27454-201ENSMUST00000185090 204 ntBASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps29Q9QZ88 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps29Q9QZ88 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Gm43173-201ENSMUST00000202246 593 ntBASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps29Q9QZ88 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps29Q9QZ88 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps29Q9QZ88 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps29Q9QZ88 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps29Q9QZ88 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms