Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn5aQ9JJV9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn5aQ9JJV9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn5aQ9JJV9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn5aQ9JJV9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn5aQ9JJV9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.04■□□□□ 0.8
Scn5aQ9JJV9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn5aQ9JJV9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.04■□□□□ 0.8
Scn5aQ9JJV9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.04■□□□□ 0.8
Scn5aQ9JJV9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn5aQ9JJV9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn5aQ9JJV9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn5aQ9JJV9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn5aQ9JJV9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scn5aQ9JJV9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.02■□□□□ 0.79
Scn5aQ9JJV9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scn5aQ9JJV9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scn5aQ9JJV9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Scn5aQ9JJV9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Gm5643-201ENSMUST00000117081 966 ntBASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn5aQ9JJV9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20■□□□□ 0.79
Scn5aQ9JJV9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20■□□□□ 0.79
Scn5aQ9JJV9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Mir6982-201ENSMUST00000184354 68 ntBASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn5aQ9JJV9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn5aQ9JJV9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn5aQ9JJV9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn5aQ9JJV9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn5aQ9JJV9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn5aQ9JJV9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Dio3-201ENSMUST00000097228 1449 ntBASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms