Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3h8Q9JJ48 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Gm27405-201ENSMUST00000184201 112 ntBASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Gm38205-201ENSMUST00000192243 258 ntBASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.81■□□□□ 0.44
Zc3h8Q9JJ48 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h8Q9JJ48 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Gm7291-201ENSMUST00000199147 382 ntBASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h8Q9JJ48 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Gm7860-201ENSMUST00000121190 879 ntBASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Zc3h8Q9JJ48 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Gm13146-201ENSMUST00000118508 780 ntBASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Notumos-201ENSMUST00000151998 2659 ntBASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h8Q9JJ48 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Zc3h8Q9JJ48 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zc3h8Q9JJ48 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zc3h8Q9JJ48 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.76■□□□□ 0.43
Zc3h8Q9JJ48 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.75■□□□□ 0.43
Zc3h8Q9JJ48 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms