Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox1Q9JJ43 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox1Q9JJ43 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Gm14117-201ENSMUST00000122417 843 ntBASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox1Q9JJ43 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox1Q9JJ43 BC021767-201ENSMUST00000126387 1716 ntBASIC16.27■□□□□ 0.19
Rbfox1Q9JJ43 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox1Q9JJ43 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox1Q9JJ43 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox1Q9JJ43 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox1Q9JJ43 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox1Q9JJ43 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox1Q9JJ43 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms