Protein–RNA interactions for Protein: Q9JIA1

Lgi1, Leucine-rich glioma-inactivated protein 1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi1Q9JIA1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lgi1Q9JIA1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lgi1Q9JIA1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.83■□□□□ 0.45
Lgi1Q9JIA1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lgi1Q9JIA1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Lgi1Q9JIA1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lgi1Q9JIA1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lgi1Q9JIA1 Gm11421-201ENSMUST00000122124 294 ntBASIC17.83■□□□□ 0.44
Lgi1Q9JIA1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lgi1Q9JIA1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lgi1Q9JIA1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lgi1Q9JIA1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lgi1Q9JIA1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Gm43060-201ENSMUST00000200621 289 ntBASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lgi1Q9JIA1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lgi1Q9JIA1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lgi1Q9JIA1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lgi1Q9JIA1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lgi1Q9JIA1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lgi1Q9JIA1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.77■□□□□ 0.44
Lgi1Q9JIA1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.77■□□□□ 0.44
Lgi1Q9JIA1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lgi1Q9JIA1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lgi1Q9JIA1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lgi1Q9JIA1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lgi1Q9JIA1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms