Protein–RNA interactions for Protein: Q9JHL1

Slc9a3r2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r2Q9JHL1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc9a3r2Q9JHL1 Golph3-205ENSMUST00000228671 2842 ntBASIC17.38■□□□□ 0.37
Slc9a3r2Q9JHL1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.38■□□□□ 0.37
Slc9a3r2Q9JHL1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc9a3r2Q9JHL1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Slc9a3r2Q9JHL1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.38■□□□□ 0.37
Slc9a3r2Q9JHL1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Slc9a3r2Q9JHL1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc9a3r2Q9JHL1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc9a3r2Q9JHL1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc9a3r2Q9JHL1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc9a3r2Q9JHL1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slc9a3r2Q9JHL1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc9a3r2Q9JHL1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slc9a3r2Q9JHL1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc9a3r2Q9JHL1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc9a3r2Q9JHL1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.33■□□□□ 0.36
Slc9a3r2Q9JHL1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc9a3r2Q9JHL1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Slc9a3r2Q9JHL1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc9a3r2Q9JHL1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc9a3r2Q9JHL1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms