Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Rarb-207ENSMUST00000225921 2756 ntBASIC20.08■□□□□ 0.81
Tlr9Q9EQU3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr9Q9EQU3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Tlr9Q9EQU3 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.08■□□□□ 0.8
Tlr9Q9EQU3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr9Q9EQU3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr9Q9EQU3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr9Q9EQU3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr9Q9EQU3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr9Q9EQU3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tlr9Q9EQU3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr9Q9EQU3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr9Q9EQU3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tlr9Q9EQU3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Tlr9Q9EQU3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr9Q9EQU3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr9Q9EQU3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr9Q9EQU3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Tlr9Q9EQU3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr9Q9EQU3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr9Q9EQU3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr9Q9EQU3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20■□□□□ 0.79
Tlr9Q9EQU3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Tlr9Q9EQU3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr9Q9EQU3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr9Q9EQU3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms