Protein–RNA interactions for Protein: Q9EPL5

Mmp1a, Interstitial collagenase A, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1aQ9EPL5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp1aQ9EPL5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp1aQ9EPL5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Mmp1aQ9EPL5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.35■□□□□ 0.53
Mmp1aQ9EPL5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.34■□□□□ 0.53
Mmp1aQ9EPL5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mmp1aQ9EPL5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mmp1aQ9EPL5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Mmp1aQ9EPL5 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.33■□□□□ 0.53
Mmp1aQ9EPL5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp1aQ9EPL5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp1aQ9EPL5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp1aQ9EPL5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mmp1aQ9EPL5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Gm2559-201ENSMUST00000201323 363 ntBASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Mmp1aQ9EPL5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Gm715-201ENSMUST00000117865 831 ntBASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp1aQ9EPL5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1aQ9EPL5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp1aQ9EPL5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
Mmp1aQ9EPL5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms