Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne8Q9DC53 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne8Q9DC53 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Mir7075-201ENSMUST00000184187 82 ntBASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.05■□□□□ 0.8
Cpne8Q9DC53 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Gm27454-201ENSMUST00000185090 204 ntBASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Cpne8Q9DC53 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Gm43173-201ENSMUST00000202246 593 ntBASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.03■□□□□ 0.8
Cpne8Q9DC53 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne8Q9DC53 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne8Q9DC53 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne8Q9DC53 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne8Q9DC53 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpne8Q9DC53 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Cpne8Q9DC53 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpne8Q9DC53 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne8Q9DC53 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20■□□□□ 0.79
Cpne8Q9DC53 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20■□□□□ 0.79
Cpne8Q9DC53 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpne8Q9DC53 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne8Q9DC53 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms