Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rsph9Q9D9V4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.8■□□□□ 0.6
Rsph9Q9D9V4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rsph9Q9D9V4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph9Q9D9V4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rsph9Q9D9V4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.8■□□□□ 0.6
Rsph9Q9D9V4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.79■□□□□ 0.6
Rsph9Q9D9V4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Gm7514-201ENSMUST00000209475 934 ntBASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rsph9Q9D9V4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Rsph9Q9D9V4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rsph9Q9D9V4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Gm12933-201ENSMUST00000120203 872 ntBASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rsph9Q9D9V4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Gm13146-201ENSMUST00000118508 780 ntBASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rsph9Q9D9V4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.74■□□□□ 0.59
Rsph9Q9D9V4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rsph9Q9D9V4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rsph9Q9D9V4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.72■□□□□ 0.59
Rsph9Q9D9V4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rsph9Q9D9V4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.72■□□□□ 0.59
Rsph9Q9D9V4 Gm38205-201ENSMUST00000192243 258 ntBASIC18.72■□□□□ 0.59
Rsph9Q9D9V4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.72■□□□□ 0.59
Rsph9Q9D9V4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms