Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf138rt1Q9D9M9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf138rt1Q9D9M9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rnf138rt1Q9D9M9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf138rt1Q9D9M9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.27■□□□□ 0.83
Rnf138rt1Q9D9M9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm42778-201ENSMUST00000199644 553 ntBASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138rt1Q9D9M9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf138rt1Q9D9M9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf138rt1Q9D9M9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rnf138rt1Q9D9M9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf138rt1Q9D9M9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf138rt1Q9D9M9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf138rt1Q9D9M9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm13534-201ENSMUST00000121169 513 ntBASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf138rt1Q9D9M9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rnf138rt1Q9D9M9 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Gm26571-201ENSMUST00000181399 666 ntBASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf138rt1Q9D9M9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 AV356131-201ENSMUST00000206201 750 ntBASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf138rt1Q9D9M9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms