Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nop56Q9D6Z1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nop56Q9D6Z1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.76■□□□□ 0.75
Nop56Q9D6Z1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nop56Q9D6Z1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nop56Q9D6Z1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nop56Q9D6Z1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nop56Q9D6Z1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Gm9870-201ENSMUST00000063874 645 ntBASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nop56Q9D6Z1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nop56Q9D6Z1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms