Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chaf1bQ9D0N7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
Chaf1bQ9D0N7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chaf1bQ9D0N7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chaf1bQ9D0N7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chaf1bQ9D0N7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chaf1bQ9D0N7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chaf1bQ9D0N7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chaf1bQ9D0N7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Chaf1bQ9D0N7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chaf1bQ9D0N7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Etf1-202ENSMUST00000180351 108 ntBASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Gm9870-201ENSMUST00000063874 645 ntBASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chaf1bQ9D0N7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms