Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp1Q9CYR0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.05□□□□□ -0.16
Ssbp1Q9CYR0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssbp1Q9CYR0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp1Q9CYR0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp1Q9CYR0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp1Q9CYR0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.02□□□□□ -0.17
Ssbp1Q9CYR0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ssbp1Q9CYR0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ssbp1Q9CYR0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Mir3960-201ENSMUST00000198213 73 ntBASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ssbp1Q9CYR0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ssbp1Q9CYR0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms