Protein–RNA interactions for Protein: Q9CY21

Bud23, Probable 18S rRNA (guanine-N(7))-methyltransferase, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bud23Q9CY21 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Bud23Q9CY21 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bud23Q9CY21 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bud23Q9CY21 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bud23Q9CY21 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bud23Q9CY21 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Bud23Q9CY21 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Gm37179-201ENSMUST00000194862 823 ntBASIC18.58■□□□□ 0.56
Bud23Q9CY21 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bud23Q9CY21 Golph3-202ENSMUST00000226517 2359 ntBASIC18.57■□□□□ 0.56
Bud23Q9CY21 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Bud23Q9CY21 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Bud23Q9CY21 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.55■□□□□ 0.56
Bud23Q9CY21 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.55■□□□□ 0.56
Bud23Q9CY21 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Bud23Q9CY21 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Bud23Q9CY21 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.54■□□□□ 0.56
Bud23Q9CY21 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.54■□□□□ 0.56
Bud23Q9CY21 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Bud23Q9CY21 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.54■□□□□ 0.56
Bud23Q9CY21 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Bud23Q9CY21 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.54■□□□□ 0.56
Bud23Q9CY21 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Bud23Q9CY21 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Bud23Q9CY21 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Bud23Q9CY21 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Bud23Q9CY21 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Bud23Q9CY21 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Bud23Q9CY21 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.52■□□□□ 0.56
Bud23Q9CY21 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.52■□□□□ 0.56
Bud23Q9CY21 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.52■□□□□ 0.56
Bud23Q9CY21 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.52■□□□□ 0.56
Bud23Q9CY21 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.52■□□□□ 0.56
Bud23Q9CY21 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Bud23Q9CY21 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Bud23Q9CY21 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms