Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufs4Q9CXZ1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ndufs4Q9CXZ1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ndufs4Q9CXZ1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndufs4Q9CXZ1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndufs4Q9CXZ1 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.33■□□□□ 0.53
Ndufs4Q9CXZ1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ndufs4Q9CXZ1 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.33■□□□□ 0.52
Ndufs4Q9CXZ1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Ndufs4Q9CXZ1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ndufs4Q9CXZ1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndufs4Q9CXZ1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ndufs4Q9CXZ1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndufs4Q9CXZ1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ndufs4Q9CXZ1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ndufs4Q9CXZ1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.27■□□□□ 0.52
Ndufs4Q9CXZ1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Ndufs4Q9CXZ1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ndufs4Q9CXZ1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ndufs4Q9CXZ1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ndufs4Q9CXZ1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufs4Q9CXZ1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufs4Q9CXZ1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufs4Q9CXZ1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms