Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldnd1Q9CQX5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Gm15565-201ENSMUST00000118890 427 ntBASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldnd1Q9CQX5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Dio3-201ENSMUST00000097228 1449 ntBASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldnd1Q9CQX5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cldnd1Q9CQX5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cldnd1Q9CQX5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldnd1Q9CQX5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Gm18666-201ENSMUST00000190039 958 ntBASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldnd1Q9CQX5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.73■□□□□ 0.75
Cldnd1Q9CQX5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Gm37055-201ENSMUST00000191866 133 ntBASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldnd1Q9CQX5 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldnd1Q9CQX5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms