Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Gm43530-201ENSMUST00000195920 274 ntBASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TpbpbQ9CQC0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TpbpbQ9CQC0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Gm40881-201ENSMUST00000223397 166 ntBASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TpbpbQ9CQC0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Gm5921-201ENSMUST00000075898 882 ntBASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TpbpbQ9CQC0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Gm13238-201ENSMUST00000117655 780 ntBASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TpbpbQ9CQC0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TpbpbQ9CQC0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TpbpbQ9CQC0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TpbpbQ9CQC0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TpbpbQ9CQC0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TpbpbQ9CQC0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TpbpbQ9CQC0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TpbpbQ9CQC0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TpbpbQ9CQC0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms