Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.69■□□□□ 0.58
Trim16Q99PP9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim16Q99PP9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim16Q99PP9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim16Q99PP9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.66■□□□□ 0.58
Trim16Q99PP9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.66■□□□□ 0.58
Trim16Q99PP9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim16Q99PP9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim16Q99PP9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Trim16Q99PP9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim16Q99PP9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim16Q99PP9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.64■□□□□ 0.57
Trim16Q99PP9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim16Q99PP9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms