Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Msh4Q99MT2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.65■□□□□ 0.58
Msh4Q99MT2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Msh4Q99MT2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.64■□□□□ 0.58
Msh4Q99MT2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Msh4Q99MT2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Gm40848-201ENSMUST00000221998 324 ntBASIC18.64■□□□□ 0.57
Msh4Q99MT2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Msh4Q99MT2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh4Q99MT2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh4Q99MT2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Gm43060-201ENSMUST00000200621 289 ntBASIC18.61■□□□□ 0.57
Msh4Q99MT2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Msh4Q99MT2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Msh4Q99MT2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.6■□□□□ 0.57
Msh4Q99MT2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh4Q99MT2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Msh4Q99MT2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh4Q99MT2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Msh4Q99MT2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh4Q99MT2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh4Q99MT2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh4Q99MT2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.58■□□□□ 0.57
Msh4Q99MT2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Msh4Q99MT2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Msh4Q99MT2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh4Q99MT2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh4Q99MT2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms