Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Thumpd1Q99J36 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Thumpd1Q99J36 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Thumpd1Q99J36 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd1Q99J36 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd1Q99J36 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd1Q99J36 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd1Q99J36 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Thumpd1Q99J36 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd1Q99J36 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd1Q99J36 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd1Q99J36 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd1Q99J36 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Thumpd1Q99J36 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Thumpd1Q99J36 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Thumpd1Q99J36 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Thumpd1Q99J36 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms