Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha11Q91Y19 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Gm38205-201ENSMUST00000192243 258 ntBASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdha11Q91Y19 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdha11Q91Y19 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Gm27405-201ENSMUST00000184201 112 ntBASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Gm7291-201ENSMUST00000199147 382 ntBASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha11Q91Y19 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha11Q91Y19 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha11Q91Y19 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha11Q91Y19 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha11Q91Y19 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Gm7860-201ENSMUST00000121190 879 ntBASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Pcdha11Q91Y19 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms