Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb1Q91Y08 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Gm26833-201ENSMUST00000180899 440 ntBASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Gm43017-201ENSMUST00000198296 752 ntBASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb1Q91Y08 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Gm27801-201ENSMUST00000184174 223 ntBASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb1Q91Y08 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb1Q91Y08 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb1Q91Y08 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb1Q91Y08 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Gm40848-201ENSMUST00000221998 324 ntBASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb1Q91Y08 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb1Q91Y08 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb1Q91Y08 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms