Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb20Q91XZ9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb20Q91XZ9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb20Q91XZ9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb20Q91XZ9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb20Q91XZ9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb20Q91XZ9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb20Q91XZ9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb20Q91XZ9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb20Q91XZ9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb20Q91XZ9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb20Q91XZ9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb20Q91XZ9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb20Q91XZ9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 AC132260.2-201ENSMUST00000224482 344 ntBASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb20Q91XZ9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms