Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb2Q91XX7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb2Q91XX7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb2Q91XX7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb2Q91XX7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Gm15820-201ENSMUST00000201566 728 ntBASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb2Q91XX7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 BC021767-201ENSMUST00000126387 1716 ntBASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhgb2Q91XX7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb2Q91XX7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdhgb2Q91XX7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms