Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Gm27454-201ENSMUST00000185090 204 ntBASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Pcdhgb4Q91XX6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb4Q91XX6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb4Q91XX6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb4Q91XX6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhgb4Q91XX6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb4Q91XX6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Gm37444-201ENSMUST00000193605 439 ntBASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Gm43173-201ENSMUST00000202246 593 ntBASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Gm45417-201ENSMUST00000209533 758 ntBASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb4Q91XX6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Gm8493-201ENSMUST00000196881 489 ntBASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb4Q91XX6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Gm12821-201ENSMUST00000120022 600 ntBASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms