Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc3Q91XX1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Gm10399-202ENSMUST00000202768 748 ntBASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc3Q91XX1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgc3Q91XX1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Gm5812-201ENSMUST00000061073 957 ntBASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhgc3Q91XX1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdhgc3Q91XX1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgc3Q91XX1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Gm15546-201ENSMUST00000122095 826 ntBASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc3Q91XX1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc3Q91XX1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms