Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp3Q91W36 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Gm42569-201ENSMUST00000200539 472 ntBASIC19.81■□□□□ 0.76
Usp3Q91W36 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp3Q91W36 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Usp3Q91W36 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp3Q91W36 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.81■□□□□ 0.76
Usp3Q91W36 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Usp3Q91W36 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp3Q91W36 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp3Q91W36 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Usp3Q91W36 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp3Q91W36 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp3Q91W36 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp3Q91W36 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp3Q91W36 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp3Q91W36 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp3Q91W36 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp3Q91W36 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp3Q91W36 Gm13146-201ENSMUST00000118508 780 ntBASIC19.79■□□□□ 0.76
Usp3Q91W36 Gm27405-201ENSMUST00000184201 112 ntBASIC19.79■□□□□ 0.76
Usp3Q91W36 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp3Q91W36 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp3Q91W36 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp3Q91W36 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Usp3Q91W36 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp3Q91W36 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Usp3Q91W36 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Usp3Q91W36 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp3Q91W36 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp3Q91W36 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp3Q91W36 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Usp3Q91W36 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp3Q91W36 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Usp3Q91W36 Gm38205-201ENSMUST00000192243 258 ntBASIC19.78■□□□□ 0.76
Usp3Q91W36 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp3Q91W36 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp3Q91W36 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp3Q91W36 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.78■□□□□ 0.76
Usp3Q91W36 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp3Q91W36 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp3Q91W36 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp3Q91W36 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp3Q91W36 Gm7291-201ENSMUST00000199147 382 ntBASIC19.77■□□□□ 0.76
Usp3Q91W36 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp3Q91W36 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp3Q91W36 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Usp3Q91W36 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp3Q91W36 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Usp3Q91W36 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Usp3Q91W36 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Usp3Q91W36 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.76■□□□□ 0.75
Usp3Q91W36 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Usp3Q91W36 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Usp3Q91W36 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp3Q91W36 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp3Q91W36 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Gm7860-201ENSMUST00000121190 879 ntBASIC19.75■□□□□ 0.75
Usp3Q91W36 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp3Q91W36 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.75■□□□□ 0.75
Usp3Q91W36 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.75■□□□□ 0.75
Usp3Q91W36 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.75■□□□□ 0.75
Usp3Q91W36 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp3Q91W36 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp3Q91W36 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp3Q91W36 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp3Q91W36 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.74■□□□□ 0.75
Usp3Q91W36 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.74■□□□□ 0.75
Usp3Q91W36 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms