Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdh18Q8VHR0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh18Q8VHR0 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh18Q8VHR0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdh18Q8VHR0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.39■□□□□ 0.54
Pcdh18Q8VHR0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Pcdh18Q8VHR0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh18Q8VHR0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh18Q8VHR0 Fst-202ENSMUST00000223640 2612 ntBASIC18.39■□□□□ 0.54
Pcdh18Q8VHR0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh18Q8VHR0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh18Q8VHR0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Gm9959-201ENSMUST00000068277 390 ntBASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh18Q8VHR0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms