Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lmcd1Q8VEE1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Lmcd1Q8VEE1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lmcd1Q8VEE1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Lmcd1Q8VEE1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lmcd1Q8VEE1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lmcd1Q8VEE1 Gm11249-201ENSMUST00000117071 859 ntBASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Gm6433-201ENSMUST00000118634 875 ntBASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Gm10231-201ENSMUST00000181584 441 ntBASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Gm10175-202ENSMUST00000208752 441 ntBASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lmcd1Q8VEE1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lmcd1Q8VEE1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lmcd1Q8VEE1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.54■□□□□ 0.88
Lmcd1Q8VEE1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Gm21362-201ENSMUST00000194272 928 ntBASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lmcd1Q8VEE1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Gm43799-201ENSMUST00000201845 579 ntBASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lmcd1Q8VEE1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lmcd1Q8VEE1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Lmcd1Q8VEE1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lmcd1Q8VEE1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms